miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|166129607|gb|FD565582.1|FD565582 TTTTTTTTTTTTTTTGGTTTATAACTTTAAATATTATTAACTGTCGACATCCAAAACTAAATAGAACACCTCATCGAATA
CTACAAGTGTTTAATTTACGAAATAGACAACTCTAAGCAAAAAAAAAAAATTGATATTTCAAGTTTTTACAACTAATTTT
AGATGATCTAAGCTACTATGATATGAAGAGCTTCGATTAAAGATGTAGTCAGGAGGAGAAAGTGGGACTGAAAAATCATA
TTCACAATCCTCAAGATCTTCATATCCCCAAAACTCTTCTTTATTTTCTTCTTCTTCTTCCATTTTCCATTTTTCTTTCT
CTATTTCTTCTCCTTCCAGTATTTCTAATACCTCGATCATGGAAGGCCGACATGGAGACGATGATCTGATACAGAGAGAC
GCAGCAAAAGCGATACGGTGAAGCTGTTTGATATCAAAGTCCTCCTCTATCCTTGGATCCACCAACTTCTCAATCTCGCC
CTCTTTTATTATGGTTTTTGCCCAGCTATGTAGGATTTGGTGGGAAGCATCAACAGGTTTTTTACCAGAAATGAGTTCAA
GTAAGAACACTCCAAAGGCAAAAACGTCAGTTTTCTCATCCACAATCCCATGTGTGTAGTACTCTGGTGCCAAGTGCCCA
AAAGTGCCTTCAATTGGAGCAATGGAATGGTGAGACCACTGAGAAGGCAACCATTTTGCCAAACCAAAATCAGATATCTG
TGGCTGAAATATTGGGTTAGGAGAACATTGG




Most similar to sp|Q8RXC8|RBK2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8RXC8|RBK2_ARATH Receptor-like cytosolic
           serine/threonine-protein kinase RBK2 OS=Arabidopsis
           thaliana GN=RBK2 PE=1 SV=1
          Length = 460

 Score =  150 bits (378), Expect = 1e-35
 Identities = 71/124 (57%), Positives = 92/124 (74%)
 Frame = -2

Query: 729 FQPQISDFGLAKWLPSQWSHHSIAPIEGTFGHLAPEYYTHGIVDEKTDVFAFGVFLLELI 550
           FQPQI DFGLAKWLP Q +HH+++  EGTFG+ APEY+ HGIVDEKTDVFAFGV LLELI
Sbjct: 279 FQPQICDFGLAKWLPKQLTHHNVSKFEGTFGYFAPEYFMHGIVDEKTDVFAFGVLLLELI 338

Query: 549 SGKKPVDASHQILHSWAKTIIKEGEIEKLVDPRIEEDFDIKQLHRIAFAASLCIRSSSPC 370
           +G   +D S Q L  WAK +++   I++LVDP + ++++ ++L R+   ASLCI  SS  
Sbjct: 339 TGHPALDESQQSLVLWAKPLLERKAIKELVDPSLGDEYNREELIRLTSTASLCIDQSSLL 398

Query: 369 RPSM 358
           RP M
Sbjct: 399 RPRM 402